Protein–RNA interactions for Protein: O75396

SEC22B, Vesicle-trafficking protein SEC22b, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22BO75396 AC027237.1-201ENST00000560942 655 ntBASIC14.04□□□□□ -0.16
SEC22BO75396 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC22BO75396 GNRHR2-203ENST00000581100 1187 ntBASIC14.04□□□□□ -0.16
SEC22BO75396 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.04□□□□□ -0.16
SEC22BO75396 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC22BO75396 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 AC002472.3-201ENST00000640124 621 ntBASIC14.04□□□□□ -0.16
SEC22BO75396 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 TUBB8P4-201ENST00000511806 1324 ntBASIC14.04□□□□□ -0.16
SEC22BO75396 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.04□□□□□ -0.16
SEC22BO75396 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 AC111170.3-201ENST00000624282 2464 ntBASIC14.04□□□□□ -0.16
SEC22BO75396 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC22BO75396 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC22BO75396 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SEC22BO75396 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC22BO75396 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SEC22BO75396 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SEC22BO75396 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SEC22BO75396 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.04□□□□□ -0.16
SEC22BO75396 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC22BO75396 BCRP2-202ENST00000447763 634 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 AC007389.4-201ENST00000454674 793 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 AL590640.2-201ENST00000457038 527 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 BCRP6-201ENST00000510112 632 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 BCRP7-201ENST00000511549 544 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 SLC25A47P1-201ENST00000531577 414 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 AC005586.2-201ENST00000563946 837 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC22BO75396 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.03□□□□□ -0.16
SEC22BO75396 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 KRT8P28-201ENST00000433288 1390 ntBASIC14.03□□□□□ -0.16
SEC22BO75396 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.03□□□□□ -0.16
SEC22BO75396 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SEC22BO75396 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SEC22BO75396 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.02□□□□□ -0.16
SEC22BO75396 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.02□□□□□ -0.16
SEC22BO75396 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 AC023794.5-201ENST00000564380 2157 ntBASIC14.02□□□□□ -0.16
SEC22BO75396 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SEC22BO75396 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SEC22BO75396 AC009093.10-201ENST00000641956 1442 ntBASIC14.02□□□□□ -0.16
SEC22BO75396 AC064801.2-201ENST00000625052 1303 ntBASIC14.02□□□□□ -0.17
SEC22BO75396 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SEC22BO75396 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
SEC22BO75396 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms