Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
RIPK2O43353 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.74□□□□□ -0.05
RIPK2O43353 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.74□□□□□ -0.05
RIPK2O43353 AL391280.1-201ENST00000506969 1062 ntBASIC14.74□□□□□ -0.05
RIPK2O43353 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 AC092552.1-201ENST00000547243 906 ntBASIC14.74□□□□□ -0.05
RIPK2O43353 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.74□□□□□ -0.05
RIPK2O43353 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.74□□□□□ -0.05
RIPK2O43353 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.74□□□□□ -0.05
RIPK2O43353 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RIPK2O43353 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RIPK2O43353 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
RIPK2O43353 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 AL445250.1-201ENST00000641671 2259 ntBASIC14.73□□□□□ -0.05
RIPK2O43353 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
RIPK2O43353 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 MRPS18AP1-201ENST00000414458 589 ntBASIC14.73□□□□□ -0.05
RIPK2O43353 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.73□□□□□ -0.05
RIPK2O43353 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.73□□□□□ -0.05
RIPK2O43353 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 AL118506.1-201ENST00000601296 3082 ntBASIC14.73□□□□□ -0.05
RIPK2O43353 PCDHA6-201ENST00000378126 3267 ntBASIC14.73□□□□□ -0.05
RIPK2O43353 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.73□□□□□ -0.05
RIPK2O43353 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 AC009093.10-201ENST00000641956 1442 ntBASIC14.73□□□□□ -0.05
RIPK2O43353 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
RIPK2O43353 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.73□□□□□ -0.05
RIPK2O43353 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RIPK2O43353 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.73□□□□□ -0.05
RIPK2O43353 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIPK2O43353 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.72□□□□□ -0.05
RIPK2O43353 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.72□□□□□ -0.05
RIPK2O43353 PDIA3P1-201ENST00000471856 1510 ntBASIC14.72□□□□□ -0.05
RIPK2O43353 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms