Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.99■□□□□ 0.63
APAF1O14727 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.99■□□□□ 0.63
APAF1O14727 AC091804.1-201ENST00000486888 567 ntBASIC18.99■□□□□ 0.63
APAF1O14727 RCC2P8-201ENST00000502779 1035 ntBASIC18.99■□□□□ 0.63
APAF1O14727 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18.99■□□□□ 0.63
APAF1O14727 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
APAF1O14727 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC18.99■□□□□ 0.63
APAF1O14727 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
APAF1O14727 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.99■□□□□ 0.63
APAF1O14727 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
APAF1O14727 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APAF1O14727 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 KRT8P24-201ENST00000560290 1559 ntBASIC18.98■□□□□ 0.63
APAF1O14727 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC18.98■□□□□ 0.63
APAF1O14727 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC18.98■□□□□ 0.63
APAF1O14727 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.98■□□□□ 0.63
APAF1O14727 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
APAF1O14727 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.98■□□□□ 0.63
APAF1O14727 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.98■□□□□ 0.63
APAF1O14727 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 AC099548.2-209ENST00000480264 625 ntBASIC18.98■□□□□ 0.63
APAF1O14727 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 AC026740.1-201ENST00000607068 791 ntBASIC18.98■□□□□ 0.63
APAF1O14727 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
APAF1O14727 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.98■□□□□ 0.63
APAF1O14727 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC18.98■□□□□ 0.63
APAF1O14727 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
APAF1O14727 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.98■□□□□ 0.63
APAF1O14727 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APAF1O14727 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
APAF1O14727 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 SLC16A6P1-201ENST00000413214 1059 ntBASIC18.97■□□□□ 0.63
APAF1O14727 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 EIF4HP1-201ENST00000453115 687 ntBASIC18.97■□□□□ 0.63
APAF1O14727 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.97■□□□□ 0.63
APAF1O14727 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.97■□□□□ 0.63
APAF1O14727 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC18.97■□□□□ 0.63
APAF1O14727 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
APAF1O14727 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.97■□□□□ 0.63
APAF1O14727 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 ARL16-210ENST00000574938 751 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 MIR3615-201ENST00000581999 87 ntBASIC18.97■□□□□ 0.63
APAF1O14727 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC18.97■□□□□ 0.63
APAF1O14727 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
APAF1O14727 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.97■□□□□ 0.63
APAF1O14727 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
APAF1O14727 TUBBP5-203ENST00000508529 1334 ntBASIC18.97■□□□□ 0.63
APAF1O14727 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms