Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00473A8K010 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
LINC00473A8K010 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00473A8K010 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 USP17L6P-201ENST00000382470 1197 ntBASIC11.81□□□□□ -0.52
LINC00473A8K010 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 CNN2P8-201ENST00000421872 913 ntBASIC11.81□□□□□ -0.52
LINC00473A8K010 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 RGS5-214ENST00000429865 754 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 INE1-201ENST00000456273 945 ntBASIC11.81□□□□□ -0.52
LINC00473A8K010 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 FUZ-207ENST00000526575 482 ntTSL 4 BASIC11.81□□□□□ -0.52
LINC00473A8K010 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 AC008825.2-201ENST00000603374 718 ntBASIC11.81□□□□□ -0.52
LINC00473A8K010 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
LINC00473A8K010 KRT8P4-201ENST00000509735 1454 ntBASIC11.81□□□□□ -0.52
LINC00473A8K010 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00473A8K010 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 AL928654.5-201ENST00000624831 2501 ntBASIC11.81□□□□□ -0.52
LINC00473A8K010 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00473A8K010 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00473A8K010 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
LINC00473A8K010 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.8□□□□□ -0.52
LINC00473A8K010 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms