Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 AC025186.1-201ENST00000478174 870 ntBASIC20.99■□□□□ 0.95
HFM1A2PYH4 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 PDXDC2P-206ENST00000534700 1315 ntBASIC20.99■□□□□ 0.95
HFM1A2PYH4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 AL031673.1-201ENST00000611460 466 ntBASIC20.99■□□□□ 0.95
HFM1A2PYH4 AC087392.5-201ENST00000612517 489 ntBASIC20.99■□□□□ 0.95
HFM1A2PYH4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 GOLGA8DP-202ENST00000341390 2184 ntBASIC20.99■□□□□ 0.95
HFM1A2PYH4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 AC145285.5-201ENST00000562217 361 ntBASIC20.98■□□□□ 0.95
HFM1A2PYH4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 AC091769.1-201ENST00000619576 568 ntBASIC20.98■□□□□ 0.95
HFM1A2PYH4 AC073911.3-201ENST00000624401 631 ntBASIC20.98■□□□□ 0.95
HFM1A2PYH4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC20.98■□□□□ 0.95
HFM1A2PYH4 AC026748.1-201ENST00000624349 3251 ntBASIC20.98■□□□□ 0.95
HFM1A2PYH4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HFM1A2PYH4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 RN7SKP109-201ENST00000410592 316 ntBASIC20.97■□□□□ 0.95
HFM1A2PYH4 HIST2H2BA-201ENST00000412169 381 ntBASIC20.97■□□□□ 0.95
HFM1A2PYH4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 CD81-209ENST00000492627 886 ntTSL 3 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 NUDT4P2-201ENST00000578341 546 ntBASIC20.97■□□□□ 0.95
HFM1A2PYH4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 GOLGA8IP-202ENST00000611635 2100 ntBASIC20.97■□□□□ 0.95
HFM1A2PYH4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC20.97■□□□□ 0.95
HFM1A2PYH4 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HFM1A2PYH4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC20.96■□□□□ 0.95
HFM1A2PYH4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HFM1A2PYH4 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HFM1A2PYH4 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HFM1A2PYH4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HFM1A2PYH4 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC20.96■□□□□ 0.95
HFM1A2PYH4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC20.96■□□□□ 0.95
HFM1A2PYH4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms