Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 KRT8P42-201ENST00000405771 1399 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC027612.2-202ENST00000445955 1199 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 VENTXP4-201ENST00000449029 958 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 RPL29P2-202ENST00000498671 657 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 PTPN20CP-201ENST00000614090 920 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 TKT-201ENST00000296289 1931 ntTSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC103702.1-201ENST00000548801 2630 ntBASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
BIVM-ERCC5R4GMW8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 HIST1H2APS2-201ENST00000454426 370 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 RN7SL684P-201ENST00000465665 294 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC008536.3-201ENST00000623282 1599 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC005077.3-201ENST00000449614 213 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC023906.1-201ENST00000486386 453 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 HNRNPA1P16-201ENST00000575692 955 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC23.19■■□□□ 1.3
BIVM-ERCC5R4GMW8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 CD37-203ENST00000426897 1204 ntTSL 2 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 FDPSP7-201ENST00000429043 1054 ntBASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC092612.1-201ENST00000514501 998 ntBASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BIVM-ERCC5R4GMW8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC010086.2-201ENST00000428616 226 ntBASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 RNU1-80P-201ENST00000459500 161 ntBASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 AC006116.2-201ENST00000589958 988 ntBASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
BIVM-ERCC5R4GMW8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms