Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 HLA-DPA2-205ENST00000433582 733 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AL627422.1-201ENST00000434104 580 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AL645638.1-201ENST00000440519 361 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AC244197.1-201ENST00000456494 951 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 RN7SL396P-201ENST00000471086 295 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AL139339.2-201ENST00000608063 657 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AC090116.1-201ENST00000615679 446 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 AL049536.1-201ENST00000625043 744 ntBASIC14.02□□□□□ -0.17
LHX6Q9UPM6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.02□□□□□ -0.17
LHX6Q9UPM6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 HNRNPDP2-201ENST00000406475 478 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AL645933.1-201ENST00000440087 609 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC092638.2-201ENST00000441105 947 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 UBE2V2P4-201ENST00000447495 259 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 TPT1P8-201ENST00000510120 555 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 MTCO1P47-201ENST00000523889 1271 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC009779.1-201ENST00000551138 283 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC009269.2-201ENST00000559892 474 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC106820.3-201ENST00000561653 397 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 CLIC1-210ENST00000616760 1098 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC106858.1-201ENST00000637497 429 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AC002472.4-201ENST00000641915 272 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 AL009178.2-201ENST00000597278 2719 ntBASIC14.01□□□□□ -0.17
LHX6Q9UPM6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LHX6Q9UPM6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14□□□□□ -0.17
LHX6Q9UPM6 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14□□□□□ -0.17
LHX6Q9UPM6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14□□□□□ -0.17
LHX6Q9UPM6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14□□□□□ -0.17
LHX6Q9UPM6 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX6Q9UPM6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX6Q9UPM6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LHX6Q9UPM6 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms