Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 AL137028.1-201ENST00000620521 555 ntBASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC21.81■■□□□ 1.08
RIMBP3Q9UFD9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AL021407.3-201ENST00000407522 486 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 MDC1-209ENST00000613547 830 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AC087163.1-201ENST00000430089 381 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AC016735.1-201ENST00000457457 237 ntTSL 2 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 RN7SL229P-201ENST00000495651 299 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AP001775.1-201ENST00000532608 586 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AC005336.1-201ENST00000585431 1243 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 AC025165.4-201ENST00000602327 433 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 MIR6741-201ENST00000618782 63 ntBASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RIMBP3Q9UFD9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 AP003680.1-201ENST00000598970 3660 ntBASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 MBL3P-201ENST00000402234 644 ntBASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 RPL35P1-201ENST00000450819 370 ntBASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 SSR3-202ENST00000463503 596 ntTSL 4 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 AC253536.5-201ENST00000506097 347 ntBASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 AL033381.2-201ENST00000603854 732 ntBASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RIMBP3Q9UFD9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 AC020893.2-201ENST00000506083 723 ntBASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RIMBP3Q9UFD9 DDC-204ENST00000426377 1700 ntTSL 3 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms