Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 RN7SL173P-201ENST00000461853 292 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 RN7SL578P-201ENST00000477781 283 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC090820.1-201ENST00000519722 591 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC091304.3-201ENST00000566500 716 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 ANKRD26P1-203ENST00000569528 966 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 RN7SL480P-201ENST00000581481 294 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 PSME2-217ENST00000615264 874 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 PSME2-218ENST00000630027 185 ntTSL 3 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC245369.7-201ENST00000631386 350 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AL162727.3-201ENST00000635661 2787 ntBASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
DKK4Q9UBT3 AC117503.4-201ENST00000623229 1418 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 LILRP2-202ENST00000413572 1383 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 CASP2-203ENST00000392925 616 ntTSL 3 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 SLC25A15P3-201ENST00000505530 290 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AC004923.3-201ENST00000527532 355 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AC016582.2-202ENST00000587765 1094 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AL591424.3-201ENST00000614278 872 ntBASIC13.22□□□□□ -0.29
DKK4Q9UBT3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
DKK4Q9UBT3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC13.21□□□□□ -0.29
DKK4Q9UBT3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms