Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 MIR1202-201ENST00000408529 83 ntBASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 AC027237.1-201ENST00000560942 655 ntBASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 AC064801.2-201ENST00000625052 1303 ntBASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.36■□□□□ 0.37
UPF3BQ9BZI7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AC234783.1-201ENST00000441761 496 ntBASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 CROCCP4-201ENST00000457096 498 ntBASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AC133552.6-201ENST00000613406 534 ntBASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 AL033527.4-201ENST00000641026 673 ntBASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UPF3BQ9BZI7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AC006001.1-201ENST00000325130 474 ntBASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 FAM86MP-201ENST00000340703 885 ntBASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.34■□□□□ 0.37
UPF3BQ9BZI7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms