Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AL138709.1-201ENST00000614840 1693 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 ACKR1-201ENST00000368121 1240 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AL645937.2-201ENST00000396808 931 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 ACTBP8-201ENST00000403258 1108 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC016694.1-201ENST00000434179 700 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC244669.2-201ENST00000612320 853 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC145423.3-201ENST00000615987 467 ntBASIC15.01□□□□□ -0.01
CCDC97Q96F63 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC97Q96F63 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CCDC97Q96F63 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15□□□□□ -0.01
CCDC97Q96F63 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 AC013726.1-201ENST00000563747 2285 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CCDC97Q96F63 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 PGGT1BP2-201ENST00000398621 1028 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15□□□□□ -0.01
CCDC97Q96F63 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 AC099548.2-209ENST00000480264 625 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15□□□□□ -0.01
CCDC97Q96F63 AC243960.2-201ENST00000600996 747 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15□□□□□ -0.01
CCDC97Q96F63 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 DNM1P41-201ENST00000623634 3350 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15□□□□□ -0.01
CCDC97Q96F63 COL6A4P2-202ENST00000504443 2753 ntBASIC15□□□□□ -0.01
CCDC97Q96F63 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC97Q96F63 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms