Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RBM8B-201ENST00000555532 525 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.41■□□□□ 0.06
DDX1Q92499 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 AC089987.1-201ENST00000551654 2209 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 AC015818.8-201ENST00000587907 1519 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 AC144522.1-201ENST00000625111 1658 ntBASIC15.41■□□□□ 0.06
DDX1Q92499 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DDX1Q92499 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.41■□□□□ 0.06
DDX1Q92499 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
DDX1Q92499 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.4■□□□□ 0.06
DDX1Q92499 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.4■□□□□ 0.06
DDX1Q92499 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
DDX1Q92499 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
DDX1Q92499 AL008707.1-201ENST00000422498 534 ntBASIC15.4■□□□□ 0.06
DDX1Q92499 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 RPSAP36-202ENST00000494591 1261 ntBASIC15.4■□□□□ 0.06
DDX1Q92499 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
DDX1Q92499 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.4■□□□□ 0.06
DDX1Q92499 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 AC100827.2-201ENST00000563214 1194 ntBASIC15.4■□□□□ 0.06
DDX1Q92499 MIR5572-201ENST00000583188 137 ntBASIC15.4■□□□□ 0.06
DDX1Q92499 AC005962.1-201ENST00000584100 773 ntBASIC15.4■□□□□ 0.06
DDX1Q92499 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.4■□□□□ 0.06
DDX1Q92499 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
DDX1Q92499 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
DDX1Q92499 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.39■□□□□ 0.05
DDX1Q92499 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 MIR33B-201ENST00000385104 96 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.39■□□□□ 0.05
DDX1Q92499 FAM58BP-201ENST00000439056 645 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 AC012441.2-201ENST00000444843 739 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 RN7SL818P-201ENST00000485099 259 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 AC006122.1-201ENST00000493323 440 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 HIST2H2BC-201ENST00000498492 580 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.39■□□□□ 0.05
DDX1Q92499 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.39■□□□□ 0.05
DDX1Q92499 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 RN7SL725P-201ENST00000606439 259 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 AC026740.1-201ENST00000607068 791 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 BAP1-211ENST00000615113 489 ntBASIC15.39■□□□□ 0.05
DDX1Q92499 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.39■□□□□ 0.05
DDX1Q92499 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.39■□□□□ 0.05
DDX1Q92499 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
DDX1Q92499 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms