Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL844908.2-201ENST00000609461 460 ntBASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 AC138969.2-201ENST00000532739 9932 ntBASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CKAP2Q8WWK9 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC060814.4-201ENST00000594169 2163 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 YBX1P5-201ENST00000509441 847 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC069262.1-201ENST00000539058 672 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 BX088702.1-201ENST00000610784 235 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 PDIA3P1-201ENST00000471856 1510 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AP003969.2-201ENST00000623739 2275 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 AL023775.1-201ENST00000454907 1746 ntBASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CKAP2Q8WWK9 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 PCDHB19P-202ENST00000625133 2914 ntBASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 PHB-210ENST00000511832 1509 ntTSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 KLF2P2-201ENST00000416807 1039 ntBASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 AL589987.1-201ENST00000453380 819 ntBASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 AC036164.1-201ENST00000570544 333 ntBASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 AC073592.8-201ENST00000624126 511 ntBASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CKAP2Q8WWK9 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms