Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL22A1Q8NFW1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 DLX4-206ENST00000611342 1662 ntBASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AC008021.1-201ENST00000474180 414 ntBASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AC099343.1-201ENST00000513481 609 ntBASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AC063977.2-201ENST00000601996 421 ntBASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AC148476.1-201ENST00000622182 705 ntBASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 CHD2-218ENST00000629346 1249 ntTSL 5 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL22A1Q8NFW1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC092865.2-201ENST00000439409 971 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 KRT18P42-201ENST00000505048 1255 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC009812.1-201ENST00000605948 1059 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AL031577.1-201ENST00000339867 399 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 LINC01833-204ENST00000444871 581 ntTSL 3 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC104212.2-201ENST00000478813 628 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 ARHGEF26-AS1-203ENST00000480639 582 ntTSL 2 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 RNF7-205ENST00000480908 782 ntTSL 4 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 AC137723.2-201ENST00000623540 398 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 CDIPT-AS1-203ENST00000638164 713 ntBASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL22A1Q8NFW1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 MIR181D-201ENST00000384853 137 ntBASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 RBMX2P5-201ENST00000424312 969 ntBASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC18.48■□□□□ 0.55
COL22A1Q8NFW1 RPL10P8-201ENST00000522888 313 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms