Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 FAM21EP-201ENST00000417804 985 ntBASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 AL929302.1-201ENST00000426556 871 ntBASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 RN7SL128P-201ENST00000467883 305 ntBASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 GOLGA2P8-201ENST00000505201 779 ntBASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 AC132825.4-202ENST00000578792 434 ntBASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 AC004554.1-201ENST00000422830 1468 ntBASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
KLHDC9Q8NEP7 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 OR2W2P-201ENST00000406313 909 ntBASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 KRT18P15-201ENST00000458108 1291 ntBASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC093300.1-201ENST00000510368 1201 ntBASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 APOC1-209ENST00000592885 562 ntTSL 3 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AL627230.2-201ENST00000613254 655 ntBASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KLHDC9Q8NEP7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.67■□□□□ 0.1
KLHDC9Q8NEP7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms