Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 AC105129.2-201ENST00000559536 390 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 AC079336.7-201ENST00000623428 1078 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 AC007952.5-201ENST00000572818 1486 ntBASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ARHGEF39Q8N4T4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CICP16-201ENST00000502609 2813 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 BRD7P5-201ENST00000299197 1822 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AC016397.2-201ENST00000624848 1985 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AL353637.1-201ENST00000451571 732 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 RN7SL277P-201ENST00000481521 288 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 IMP3P2-201ENST00000489760 475 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AC026803.1-201ENST00000569130 274 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CU633904.3-201ENST00000624042 1029 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 SHMT1P1-201ENST00000419974 1312 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 TUBB8P4-201ENST00000511806 1324 ntBASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ARHGEF39Q8N4T4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ARHGEF39Q8N4T4 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms