Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ZNF546Q86UE3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AL445250.1-201ENST00000641671 2259 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 ZNF259P1-201ENST00000407656 1365 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AL450487.1-201ENST00000426799 995 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 KRT18P8-201ENST00000581937 1246 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC092364.2-202ENST00000597012 1073 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC092865.6-201ENST00000642101 219 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AC102953.2-201ENST00000609755 3026 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 MCFD2-212ENST00000444761 4169 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.11□□□□□ -0.47
ZNF546Q86UE3 HLA-A-201ENST00000376802 1334 ntBASIC12.11□□□□□ -0.47
ZNF546Q86UE3 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ZNF546Q86UE3 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms