Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 AC015819.3-201ENST00000624305 2674 ntBASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TMEM53Q6P2H8 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AL138799.1-201ENST00000448213 1675 ntBASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AL162726.2-201ENST00000438986 1017 ntBASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 GAPDHP40-201ENST00000505218 1006 ntBASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 MIR497HG-202ENST00000572453 3838 ntBASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AL022323.5-201ENST00000624101 2059 ntBASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TMEM53Q6P2H8 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 AP001267.2-201ENST00000532619 2086 ntBASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TMEM53Q6P2H8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms