Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.69□□□□□ -0.38
FAM27BQ5VT28 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 POM121L10P-201ENST00000436994 1285 ntBASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AC005730.2-201ENST00000564549 1184 ntBASIC12.69□□□□□ -0.38
FAM27BQ5VT28 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AL591471.1-201ENST00000621855 229 ntBASIC12.69□□□□□ -0.38
FAM27BQ5VT28 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.69□□□□□ -0.38
FAM27BQ5VT28 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 MBLAC2-202ENST00000514906 1936 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 RPL18P13-201ENST00000478088 569 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AC022217.1-201ENST00000521069 738 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 FAM8A2P-201ENST00000528813 1142 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 PGAM1P5-201ENST00000548011 764 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.68□□□□□ -0.38
FAM27BQ5VT28 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
FAM27BQ5VT28 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms