Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 MPV17-209ENST00000405983 859 ntTSL 5 BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 PTPN20CP-201ENST00000614090 920 ntBASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 AC148477.9-201ENST00000623974 539 ntBASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPAQ5VT25 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 RPL18AP16-201ENST00000424057 531 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC027612.2-202ENST00000445955 1199 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 RNA5SP420-201ENST00000516997 137 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC008741.2-201ENST00000612792 3115 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC133141.1-201ENST00000443015 339 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 HNRNPA1P16-201ENST00000575692 955 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPAQ5VT25 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 AC103702.1-201ENST00000548801 2630 ntBASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 AC006116.2-201ENST00000589958 988 ntBASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 AC123912.6-201ENST00000612657 315 ntBASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 AC093462.1-201ENST00000621167 1683 ntBASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 CASP16P-204ENST00000635032 809 ntBASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC21.11■□□□□ 0.97
CDC42BPAQ5VT25 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 FAM226B-201ENST00000602508 1490 ntBASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 KRT18P33-201ENST00000398525 1043 ntBASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 SNU13-204ENST00000402458 462 ntTSL 3 BASIC21.1■□□□□ 0.97
CDC42BPAQ5VT25 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms