Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC9.97□□□□□ -0.81
LINC00242Q5T6M2 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC9.96□□□□□ -0.81
LINC00242Q5T6M2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 USP17L6P-201ENST00000382470 1197 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 MIR943-201ENST00000401286 94 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 FAM86GP-201ENST00000448322 971 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC104596.2-201ENST00000512793 793 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 DOC2GP-202ENST00000514950 1163 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC124283.3-201ENST00000570869 594 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 KRT18P8-201ENST00000581937 1246 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 LINC02486-201ENST00000604157 3000 ntBASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
LINC00242Q5T6M2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms