Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC021016.3-201ENST00000608367 477 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 AL022334.2-201ENST00000610000 484 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 LINC01783-202ENST00000614408 828 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 BX284668.2-205ENST00000619677 828 ntBASIC16.62■□□□□ 0.25
USH1GQ495M9 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.62■□□□□ 0.25
USH1GQ495M9 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.62■□□□□ 0.25
USH1GQ495M9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
USH1GQ495M9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USH1GQ495M9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 AC092580.1-201ENST00000433998 658 ntBASIC16.61■□□□□ 0.25
USH1GQ495M9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.61■□□□□ 0.25
USH1GQ495M9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 RN7SL67P-201ENST00000492147 296 ntBASIC16.61■□□□□ 0.25
USH1GQ495M9 PRKXP1-201ENST00000561423 1122 ntBASIC16.61■□□□□ 0.25
USH1GQ495M9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.61■□□□□ 0.25
USH1GQ495M9 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 AL591471.1-201ENST00000621855 229 ntBASIC16.61■□□□□ 0.25
USH1GQ495M9 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.61■□□□□ 0.25
USH1GQ495M9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 AC097376.2-205ENST00000610159 5334 ntBASIC16.61■□□□□ 0.25
USH1GQ495M9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USH1GQ495M9 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
USH1GQ495M9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
USH1GQ495M9 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.6■□□□□ 0.25
USH1GQ495M9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.6■□□□□ 0.25
USH1GQ495M9 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.6■□□□□ 0.25
USH1GQ495M9 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.6■□□□□ 0.25
USH1GQ495M9 DUX4L50-201ENST00000455245 715 ntBASIC16.6■□□□□ 0.25
USH1GQ495M9 TPT1P11-201ENST00000458482 498 ntBASIC16.6■□□□□ 0.25
USH1GQ495M9 RN7SL258P-201ENST00000478664 300 ntBASIC16.6■□□□□ 0.25
USH1GQ495M9 RN7SL530P-201ENST00000485097 298 ntBASIC16.6■□□□□ 0.25
USH1GQ495M9 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.6■□□□□ 0.25
USH1GQ495M9 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USH1GQ495M9 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.6■□□□□ 0.25
USH1GQ495M9 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.6■□□□□ 0.25
USH1GQ495M9 PHBP15-201ENST00000574228 665 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms