Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TSR1Q2NL82 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.07■□□□□ 0.16
TSR1Q2NL82 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 CICP16-201ENST00000502609 2813 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 KLF2P2-201ENST00000416807 1039 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC022494.1-201ENST00000466044 728 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC023310.3-201ENST00000557027 670 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC100756.1-201ENST00000562736 682 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC104794.3-201ENST00000566840 1248 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC138749.3-201ENST00000567691 622 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 MIR4745-201ENST00000577608 62 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC116165.1-201ENST00000611806 668 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC107918.4-201ENST00000641966 3141 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TSR1Q2NL82 HSPA8P5-201ENST00000456928 2069 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 AC011498.7-201ENST00000624986 2027 ntBASIC16.06■□□□□ 0.16
TSR1Q2NL82 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSR1Q2NL82 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.05■□□□□ 0.16
TSR1Q2NL82 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSR1Q2NL82 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms