Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 AHCYP2-201ENST00000430630 1300 ntBASIC14.34□□□□□ -0.11
CDKL1Q00532 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.34□□□□□ -0.11
CDKL1Q00532 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CDKL1Q00532 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.34□□□□□ -0.11
CDKL1Q00532 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKL1Q00532 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKL1Q00532 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.33□□□□□ -0.11
CDKL1Q00532 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKL1Q00532 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CDKL1Q00532 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKL1Q00532 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.33□□□□□ -0.11
CDKL1Q00532 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CDKL1Q00532 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.11
CDKL1Q00532 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 AC015818.8-201ENST00000587907 1519 ntBASIC14.33□□□□□ -0.12
CDKL1Q00532 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.33□□□□□ -0.12
CDKL1Q00532 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 AC010141.1-201ENST00000411585 623 ntBASIC14.33□□□□□ -0.12
CDKL1Q00532 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.33□□□□□ -0.12
CDKL1Q00532 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.33□□□□□ -0.12
CDKL1Q00532 RPL7P3-201ENST00000441388 714 ntBASIC14.33□□□□□ -0.12
CDKL1Q00532 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.33□□□□□ -0.12
CDKL1Q00532 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.33□□□□□ -0.12
CDKL1Q00532 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 MIR4683-201ENST00000579659 81 ntBASIC14.33□□□□□ -0.12
CDKL1Q00532 AL358472.3-201ENST00000608147 415 ntBASIC14.33□□□□□ -0.12
CDKL1Q00532 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.33□□□□□ -0.12
CDKL1Q00532 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.33□□□□□ -0.12
CDKL1Q00532 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CDKL1Q00532 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.33□□□□□ -0.12
CDKL1Q00532 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CDKL1Q00532 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDKL1Q00532 AL591122.2-201ENST00000624125 1853 ntBASIC14.32□□□□□ -0.12
CDKL1Q00532 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKL1Q00532 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.32□□□□□ -0.12
CDKL1Q00532 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKL1Q00532 CHMP1AP1-201ENST00000445563 662 ntBASIC14.32□□□□□ -0.12
CDKL1Q00532 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.32□□□□□ -0.12
CDKL1Q00532 TMEM198B-204ENST00000484016 896 ntBASIC14.32□□□□□ -0.12
CDKL1Q00532 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.32□□□□□ -0.12
CDKL1Q00532 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.32□□□□□ -0.12
CDKL1Q00532 AC079316.1-201ENST00000548397 411 ntBASIC14.32□□□□□ -0.12
CDKL1Q00532 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.32□□□□□ -0.12
CDKL1Q00532 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.32□□□□□ -0.12
CDKL1Q00532 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDKL1Q00532 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms