Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 RN7SL111P-201ENST00000468841 285 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC8.57□□□□□ -1.04
HSPG2P98160 SELENOK-205ENST00000541726 814 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC8.57□□□□□ -1.04
HSPG2P98160 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 STK25-235ENST00000543554 2556 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC8.57□□□□□ -1.04
HSPG2P98160 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 GPI-205ENST00000586425 1799 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 SNU13-204ENST00000402458 462 ntTSL 3 BASIC8.57□□□□□ -1.04
HSPG2P98160 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 FTH1-205ENST00000529631 507 ntTSL 4 BASIC8.57□□□□□ -1.04
HSPG2P98160 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC8.57□□□□□ -1.04
HSPG2P98160 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 CTNNBL1-203ENST00000373473 1493 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 RPL13AP5-201ENST00000439189 612 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC8.57□□□□□ -1.04
HSPG2P98160 AP001102.1-201ENST00000528959 409 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC8.57□□□□□ -1.04
HSPG2P98160 AC091691.1-201ENST00000583587 1018 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 BIN3-212ENST00000640731 450 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
HSPG2P98160 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 AC011477.7-201ENST00000617163 1440 ntBASIC8.56□□□□□ -1.04
HSPG2P98160 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
HSPG2P98160 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
HSPG2P98160 AL391903.1-201ENST00000407513 365 ntBASIC8.56□□□□□ -1.04
HSPG2P98160 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC8.56□□□□□ -1.04
HSPG2P98160 AC012100.1-201ENST00000470304 282 ntBASIC8.56□□□□□ -1.04
HSPG2P98160 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC8.56□□□□□ -1.04
HSPG2P98160 AC022382.1-201ENST00000602768 336 ntBASIC8.56□□□□□ -1.04
HSPG2P98160 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HSPG2P98160 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 CYP2T1P-202ENST00000641596 2535 ntBASIC8.56□□□□□ -1.04
HSPG2P98160 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC8.56□□□□□ -1.04
HSPG2P98160 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC8.56□□□□□ -1.04
HSPG2P98160 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC8.56□□□□□ -1.04
HSPG2P98160 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HSPG2P98160 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
HSPG2P98160 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC8.56□□□□□ -1.04
HSPG2P98160 RN7SL22P-201ENST00000471800 269 ntBASIC8.56□□□□□ -1.04
HSPG2P98160 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC8.56□□□□□ -1.04
HSPG2P98160 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC8.56□□□□□ -1.04
HSPG2P98160 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC8.56□□□□□ -1.04
HSPG2P98160 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
HSPG2P98160 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
HSPG2P98160 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC8.55□□□□□ -1.04
HSPG2P98160 NLK-203ENST00000582037 1503 ntTSL 2 BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms