Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.26□□□□□ -0.29
CXCR4P61073 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
CXCR4P61073 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 AL138725.1-201ENST00000407347 1314 ntBASIC13.26□□□□□ -0.29
CXCR4P61073 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.26□□□□□ -0.29
CXCR4P61073 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.26□□□□□ -0.29
CXCR4P61073 RPL13AP25-201ENST00000484130 612 ntBASIC13.26□□□□□ -0.29
CXCR4P61073 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.26□□□□□ -0.29
CXCR4P61073 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.26□□□□□ -0.29
CXCR4P61073 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.26□□□□□ -0.29
CXCR4P61073 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.26□□□□□ -0.29
CXCR4P61073 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.26□□□□□ -0.29
CXCR4P61073 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.26□□□□□ -0.29
CXCR4P61073 AC138761.1-201ENST00000584393 385 ntBASIC13.26□□□□□ -0.29
CXCR4P61073 AC093813.1-201ENST00000605066 256 ntBASIC13.26□□□□□ -0.29
CXCR4P61073 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 AC093028.1-201ENST00000622998 982 ntBASIC13.26□□□□□ -0.29
CXCR4P61073 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CXCR4P61073 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CXCR4P61073 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 AC026271.4-201ENST00000578214 1833 ntBASIC13.25□□□□□ -0.29
CXCR4P61073 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.25□□□□□ -0.29
CXCR4P61073 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.25□□□□□ -0.29
CXCR4P61073 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 RN7SL399P-201ENST00000471648 279 ntBASIC13.25□□□□□ -0.29
CXCR4P61073 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.25□□□□□ -0.29
CXCR4P61073 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
CXCR4P61073 AC008738.7-201ENST00000609744 511 ntBASIC13.25□□□□□ -0.29
CXCR4P61073 AL662799.1-202ENST00000614205 422 ntBASIC13.25□□□□□ -0.29
CXCR4P61073 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CXCR4P61073 AC107375.1-201ENST00000564464 2231 ntBASIC13.25□□□□□ -0.29
CXCR4P61073 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CXCR4P61073 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CXCR4P61073 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms