Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.67□□□□□ -0.06
LIMK2P53671 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LIMK2P53671 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LIMK2P53671 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 MTX1P1-201ENST00000440904 838 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.67□□□□□ -0.06
LIMK2P53671 PUDPP3-201ENST00000445368 636 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 AL591846.1-201ENST00000451736 433 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 AC104306.2-201ENST00000451877 341 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.67□□□□□ -0.06
LIMK2P53671 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 AL391280.1-201ENST00000506969 1062 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 ZNF767P-206ENST00000513792 565 ntBASIC14.67□□□□□ -0.06
LIMK2P53671 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.67□□□□□ -0.06
LIMK2P53671 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.67□□□□□ -0.06
LIMK2P53671 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.67□□□□□ -0.06
LIMK2P53671 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.67□□□□□ -0.06
LIMK2P53671 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
LIMK2P53671 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LIMK2P53671 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 AP000593.2-201ENST00000542775 1433 ntBASIC14.66□□□□□ -0.06
LIMK2P53671 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 AC015818.8-201ENST00000587907 1519 ntBASIC14.66□□□□□ -0.06
LIMK2P53671 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.66□□□□□ -0.06
LIMK2P53671 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
LIMK2P53671 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LIMK2P53671 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 CNN2P10-201ENST00000443067 918 ntBASIC14.66□□□□□ -0.06
LIMK2P53671 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 AP001258.2-201ENST00000529891 490 ntBASIC14.66□□□□□ -0.06
LIMK2P53671 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.66□□□□□ -0.06
LIMK2P53671 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.66□□□□□ -0.06
LIMK2P53671 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.66□□□□□ -0.06
LIMK2P53671 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.66□□□□□ -0.06
LIMK2P53671 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.65□□□□□ -0.06
LIMK2P53671 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
LIMK2P53671 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LIMK2P53671 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms