Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT6CP48668 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
KRT6CP48668 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KRT6CP48668 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
KRT6CP48668 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.15□□□□□ -0.14
KRT6CP48668 CICP17-201ENST00000418553 2377 ntBASIC14.15□□□□□ -0.14
KRT6CP48668 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
KRT6CP48668 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 CICP16-201ENST00000502609 2813 ntBASIC14.14□□□□□ -0.15
KRT6CP48668 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 AC092933.1-201ENST00000393644 945 ntBASIC14.14□□□□□ -0.15
KRT6CP48668 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 BCRP2-202ENST00000447763 634 ntBASIC14.14□□□□□ -0.15
KRT6CP48668 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 BCRP6-201ENST00000510112 632 ntBASIC14.14□□□□□ -0.15
KRT6CP48668 BCRP7-201ENST00000511549 544 ntBASIC14.14□□□□□ -0.15
KRT6CP48668 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.14□□□□□ -0.15
KRT6CP48668 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.14□□□□□ -0.15
KRT6CP48668 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
KRT6CP48668 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
KRT6CP48668 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 AC064801.2-201ENST00000625052 1303 ntBASIC14.14□□□□□ -0.15
KRT6CP48668 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
KRT6CP48668 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6CP48668 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.13□□□□□ -0.15
KRT6CP48668 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6CP48668 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6CP48668 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 KRT8P28-201ENST00000433288 1390 ntBASIC14.13□□□□□ -0.15
KRT6CP48668 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6CP48668 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
KRT6CP48668 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
KRT6CP48668 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
KRT6CP48668 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6CP48668 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
KRT6CP48668 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.13□□□□□ -0.15
KRT6CP48668 AC016694.1-201ENST00000434179 700 ntBASIC14.13□□□□□ -0.15
KRT6CP48668 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.13□□□□□ -0.15
KRT6CP48668 AL590640.2-201ENST00000457038 527 ntBASIC14.13□□□□□ -0.15
KRT6CP48668 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms