Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 IFNWP2-201ENST00000431203 580 ntBASIC17.6■□□□□ 0.41
TM4SF1P30408 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.6■□□□□ 0.41
TM4SF1P30408 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.6■□□□□ 0.41
TM4SF1P30408 ALG1L7P-201ENST00000502317 768 ntBASIC17.6■□□□□ 0.41
TM4SF1P30408 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF1P30408 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF1P30408 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TM4SF1P30408 AL049840.2-201ENST00000602722 535 ntBASIC17.6■□□□□ 0.41
TM4SF1P30408 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 AL031673.1-201ENST00000611460 466 ntBASIC17.6■□□□□ 0.41
TM4SF1P30408 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC17.6■□□□□ 0.41
TM4SF1P30408 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF1P30408 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF1P30408 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.6■□□□□ 0.41
TM4SF1P30408 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.6■□□□□ 0.41
TM4SF1P30408 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TM4SF1P30408 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 MTHFR-210ENST00000641407 2387 ntBASIC17.59■□□□□ 0.41
TM4SF1P30408 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 AL157823.1-201ENST00000403727 628 ntBASIC17.59■□□□□ 0.41
TM4SF1P30408 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.59■□□□□ 0.41
TM4SF1P30408 AC004522.1-201ENST00000419978 654 ntBASIC17.59■□□□□ 0.41
TM4SF1P30408 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC17.59■□□□□ 0.41
TM4SF1P30408 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.59■□□□□ 0.41
TM4SF1P30408 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.59■□□□□ 0.41
TM4SF1P30408 AC078814.4-201ENST00000546650 327 ntBASIC17.59■□□□□ 0.41
TM4SF1P30408 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TM4SF1P30408 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.59■□□□□ 0.41
TM4SF1P30408 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TM4SF1P30408 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.58■□□□□ 0.41
TM4SF1P30408 AC092384.3-202ENST00000564646 2873 ntBASIC17.58■□□□□ 0.41
TM4SF1P30408 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF1P30408 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TM4SF1P30408 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TM4SF1P30408 ABCD1P4-201ENST00000399687 604 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TM4SF1P30408 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 CDCA4P4-201ENST00000435216 680 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.58■□□□□ 0.4
TM4SF1P30408 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.58■□□□□ 0.4
TM4SF1P30408 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC17.58■□□□□ 0.4
TM4SF1P30408 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.58■□□□□ 0.4
TM4SF1P30408 IGHEP1-201ENST00000521393 651 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.58■□□□□ 0.4
TM4SF1P30408 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.58■□□□□ 0.4
TM4SF1P30408 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.58■□□□□ 0.4
TM4SF1P30408 AL359219.1-201ENST00000556311 934 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 HNRNPA1P16-201ENST00000575692 955 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 FBXO36P1-201ENST00000579006 471 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.58■□□□□ 0.4
TM4SF1P30408 AC004686.1-201ENST00000605113 538 ntBASIC17.58■□□□□ 0.4
TM4SF1P30408 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms