Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
VARSP26640 AC020910.5-201ENST00000623668 1865 ntBASIC14.42□□□□□ -0.1
VARSP26640 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.42□□□□□ -0.1
VARSP26640 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 AC011840.2-201ENST00000563063 1520 ntBASIC14.41□□□□□ -0.1
VARSP26640 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.41□□□□□ -0.1
VARSP26640 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 CES1P1-201ENST00000421606 1704 ntBASIC14.41□□□□□ -0.1
VARSP26640 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 RN7SKP230-201ENST00000365642 335 ntBASIC14.41□□□□□ -0.1
VARSP26640 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC14.41□□□□□ -0.1
VARSP26640 FTH1P14-201ENST00000482930 551 ntBASIC14.41□□□□□ -0.1
VARSP26640 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.41□□□□□ -0.1
VARSP26640 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.41□□□□□ -0.1
VARSP26640 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.41□□□□□ -0.1
VARSP26640 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 RN7SL48P-201ENST00000579283 293 ntBASIC14.41□□□□□ -0.1
VARSP26640 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 AC244093.1-201ENST00000610837 814 ntBASIC14.41□□□□□ -0.1
VARSP26640 AC244669.2-201ENST00000612320 853 ntBASIC14.41□□□□□ -0.1
VARSP26640 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 AC083964.2-201ENST00000623988 2396 ntBASIC14.41□□□□□ -0.1
VARSP26640 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
VARSP26640 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
VARSP26640 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
VARSP26640 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.41□□□□□ -0.1
VARSP26640 AL138725.1-201ENST00000407347 1314 ntBASIC14.41□□□□□ -0.1
VARSP26640 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
VARSP26640 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 AGGF1P1-201ENST00000509500 2073 ntBASIC14.4□□□□□ -0.1
VARSP26640 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 TPM3P8-201ENST00000330554 643 ntBASIC14.4□□□□□ -0.1
VARSP26640 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
VARSP26640 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.4□□□□□ -0.1
VARSP26640 AC092506.1-202ENST00000401022 528 ntBASIC14.4□□□□□ -0.1
VARSP26640 AC099336.1-201ENST00000417053 1171 ntBASIC14.4□□□□□ -0.1
VARSP26640 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 AC016694.1-201ENST00000434179 700 ntBASIC14.4□□□□□ -0.1
VARSP26640 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
VARSP26640 AC007551.1-201ENST00000457394 519 ntBASIC14.4□□□□□ -0.1
VARSP26640 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
VARSP26640 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.4□□□□□ -0.1
VARSP26640 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.4□□□□□ -0.1
VARSP26640 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.4□□□□□ -0.1
VARSP26640 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.4□□□□□ -0.1
VARSP26640 AC010328.2-201ENST00000597698 1111 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms