Protein–RNA interactions for Protein: P17482

HOXB9, Homeobox protein Hox-B9, humanhuman

Predicted RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB9P17482 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.62□□□□□ -0.23
HOXB9P17482 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
HOXB9P17482 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
HOXB9P17482 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXB9P17482 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXB9P17482 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXB9P17482 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.62□□□□□ -0.23
HOXB9P17482 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXB9P17482 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
HOXB9P17482 PDIA3P1-201ENST00000471856 1510 ntBASIC13.62□□□□□ -0.23
HOXB9P17482 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HOXB9P17482 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXB9P17482 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HOXB9P17482 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXB9P17482 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.62□□□□□ -0.23
HOXB9P17482 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HOXB9P17482 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HOXB9P17482 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.62□□□□□ -0.23
HOXB9P17482 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
HOXB9P17482 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 CICP20-201ENST00000443330 2801 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HOXB9P17482 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXB9P17482 AK2P2-201ENST00000439142 405 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 AL645933.1-201ENST00000440087 609 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 CHMP1AP1-201ENST00000445563 662 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXB9P17482 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.61□□□□□ -0.23
HOXB9P17482 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 C2orf69P2-201ENST00000562032 1123 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXB9P17482 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.61□□□□□ -0.23
HOXB9P17482 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 AC006453.4-201ENST00000636949 1252 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
HOXB9P17482 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
HOXB9P17482 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HOXB9P17482 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HOXB9P17482 AL359845.1-201ENST00000458202 1648 ntBASIC13.61□□□□□ -0.23
HOXB9P17482 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HOXB9P17482 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
HOXB9P17482 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms