Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 FP325330.2-201ENST00000624219 5630 ntBASIC13.22□□□□□ -0.29
HMGN1P05114 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.22□□□□□ -0.29
HMGN1P05114 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.22□□□□□ -0.29
HMGN1P05114 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.22□□□□□ -0.29
HMGN1P05114 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.22□□□□□ -0.29
HMGN1P05114 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
HMGN1P05114 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HMGN1P05114 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HMGN1P05114 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.22□□□□□ -0.29
HMGN1P05114 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 AGAP10P-201ENST00000454844 2418 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 CLUHP2-201ENST00000426660 1303 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 FKBP4P6-201ENST00000457486 1332 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGN1P05114 MRPS18AP1-201ENST00000414458 589 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 ARSEP1-201ENST00000420443 635 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGN1P05114 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 PUDPP3-201ENST00000445368 636 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 MYCLP2-201ENST00000449268 967 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.21□□□□□ -0.29
HMGN1P05114 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 AC123567.1-201ENST00000548294 1261 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 AC027237.1-201ENST00000560942 655 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 AC005586.2-201ENST00000563946 837 ntBASIC13.21□□□□□ -0.29
HMGN1P05114 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGN1P05114 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.21□□□□□ -0.29
HMGN1P05114 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HMGN1P05114 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.21□□□□□ -0.29
HMGN1P05114 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGN1P05114 Z82170.1-201ENST00000625081 3192 ntBASIC13.21□□□□□ -0.3
HMGN1P05114 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGN1P05114 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGN1P05114 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
HMGN1P05114 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
HMGN1P05114 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
HMGN1P05114 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
HMGN1P05114 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
HMGN1P05114 AL591122.2-201ENST00000624125 1853 ntBASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms