Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CHGBP05060 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHGBP05060 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.32■□□□□ 0.36
CHGBP05060 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.32■□□□□ 0.36
CHGBP05060 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.32■□□□□ 0.36
CHGBP05060 OR8T1P-201ENST00000421347 918 ntBASIC17.32■□□□□ 0.36
CHGBP05060 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.32■□□□□ 0.36
CHGBP05060 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.32■□□□□ 0.36
CHGBP05060 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.32■□□□□ 0.36
CHGBP05060 AC105129.2-201ENST00000559536 390 ntBASIC17.32■□□□□ 0.36
CHGBP05060 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.32■□□□□ 0.36
CHGBP05060 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHGBP05060 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHGBP05060 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHGBP05060 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CHGBP05060 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 AC239868.1-201ENST00000369385 493 ntBASIC17.31■□□□□ 0.36
CHGBP05060 SLC25A24P2-201ENST00000415059 510 ntBASIC17.31■□□□□ 0.36
CHGBP05060 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.31■□□□□ 0.36
CHGBP05060 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.31■□□□□ 0.36
CHGBP05060 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 FGFR3P5-201ENST00000564496 886 ntBASIC17.31■□□□□ 0.36
CHGBP05060 AC020922.3-201ENST00000595064 547 ntBASIC17.31■□□□□ 0.36
CHGBP05060 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.31■□□□□ 0.36
CHGBP05060 AC021016.3-201ENST00000608367 477 ntBASIC17.31■□□□□ 0.36
CHGBP05060 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 NAP1L6-202ENST00000641404 1222 ntBASIC17.31■□□□□ 0.36
CHGBP05060 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CHGBP05060 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 AC005014.1-201ENST00000432006 2976 ntBASIC17.31■□□□□ 0.36
CHGBP05060 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.31■□□□□ 0.36
CHGBP05060 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHGBP05060 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 AC005840.4-201ENST00000541242 2494 ntBASIC17.3■□□□□ 0.36
CHGBP05060 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 AC104581.4-201ENST00000623126 3052 ntBASIC17.3■□□□□ 0.36
CHGBP05060 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CHGBP05060 AC067931.2-201ENST00000623655 2003 ntBASIC17.3■□□□□ 0.36
CHGBP05060 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.3■□□□□ 0.36
CHGBP05060 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 MIR769-201ENST00000390225 118 ntBASIC17.3■□□□□ 0.36
CHGBP05060 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.3■□□□□ 0.36
CHGBP05060 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.3■□□□□ 0.36
CHGBP05060 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.3■□□□□ 0.36
CHGBP05060 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CHGBP05060 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.3■□□□□ 0.36
CHGBP05060 AC100757.4-201ENST00000626934 759 ntBASIC17.3■□□□□ 0.36
CHGBP05060 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.3■□□□□ 0.36
CHGBP05060 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.3■□□□□ 0.36
CHGBP05060 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHGBP05060 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms