Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.24□□□□□ -0.61
TYMSP04818 KRT8P35-201ENST00000483942 1338 ntBASIC11.24□□□□□ -0.61
TYMSP04818 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC11.24□□□□□ -0.61
TYMSP04818 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TYMSP04818 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.24□□□□□ -0.61
TYMSP04818 AC018445.4-201ENST00000624066 2291 ntBASIC11.24□□□□□ -0.61
TYMSP04818 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.24□□□□□ -0.61
TYMSP04818 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 AC008620.2-201ENST00000510294 1569 ntBASIC11.24□□□□□ -0.61
TYMSP04818 AGAP12P-201ENST00000585227 2359 ntBASIC11.24□□□□□ -0.61
TYMSP04818 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
TYMSP04818 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TYMSP04818 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TYMSP04818 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 MYADML-201ENST00000474610 2147 ntBASIC11.23□□□□□ -0.61
TYMSP04818 AC060814.4-201ENST00000594169 2163 ntBASIC11.23□□□□□ -0.61
TYMSP04818 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.23□□□□□ -0.61
TYMSP04818 UPF3AP3-201ENST00000420996 769 ntBASIC11.23□□□□□ -0.61
TYMSP04818 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.23□□□□□ -0.61
TYMSP04818 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.23□□□□□ -0.61
TYMSP04818 HLA-V-204ENST00000476601 1289 ntBASIC11.23□□□□□ -0.61
TYMSP04818 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC11.23□□□□□ -0.61
TYMSP04818 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.23□□□□□ -0.61
TYMSP04818 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 AC069262.1-201ENST00000539058 672 ntBASIC11.23□□□□□ -0.61
TYMSP04818 AL512356.2-201ENST00000546955 174 ntBASIC11.23□□□□□ -0.61
TYMSP04818 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.23□□□□□ -0.61
TYMSP04818 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
TYMSP04818 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TYMSP04818 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.23□□□□□ -0.61
TYMSP04818 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
TYMSP04818 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TYMSP04818 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
TYMSP04818 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.22□□□□□ -0.61
TYMSP04818 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 TOMM22P5-201ENST00000416399 439 ntBASIC11.22□□□□□ -0.61
TYMSP04818 AC254562.1-201ENST00000417586 456 ntBASIC11.22□□□□□ -0.61
TYMSP04818 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.22□□□□□ -0.61
TYMSP04818 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TYMSP04818 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.22□□□□□ -0.61
TYMSP04818 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.22□□□□□ -0.61
TYMSP04818 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TYMSP04818 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.22□□□□□ -0.61
TYMSP04818 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms