Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.77□□□□□ -0.21
MT-ND1P03886 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.77□□□□□ -0.21
MT-ND1P03886 AC004790.1-201ENST00000612686 536 ntBASIC13.77□□□□□ -0.21
MT-ND1P03886 AC106028.4-201ENST00000614509 607 ntBASIC13.77□□□□□ -0.21
MT-ND1P03886 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.77□□□□□ -0.21
MT-ND1P03886 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
MT-ND1P03886 PCDHA5-203ENST00000614258 4248 ntBASIC13.77□□□□□ -0.21
MT-ND1P03886 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
MT-ND1P03886 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
MT-ND1P03886 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MRPL37P1-201ENST00000592451 1337 ntBASIC13.76□□□□□ -0.21
MT-ND1P03886 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 SPDYE19P-201ENST00000338590 713 ntBASIC13.76□□□□□ -0.21
MT-ND1P03886 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
MT-ND1P03886 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 AL139094.1-201ENST00000405549 1188 ntBASIC13.76□□□□□ -0.21
MT-ND1P03886 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.76□□□□□ -0.21
MT-ND1P03886 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.76□□□□□ -0.21
MT-ND1P03886 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 BRI3BPP1-201ENST00000594224 787 ntBASIC13.76□□□□□ -0.21
MT-ND1P03886 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 MIR6074-201ENST00000612054 107 ntBASIC13.76□□□□□ -0.21
MT-ND1P03886 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.76□□□□□ -0.21
MT-ND1P03886 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.76□□□□□ -0.21
MT-ND1P03886 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
MT-ND1P03886 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.75□□□□□ -0.21
MT-ND1P03886 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
MT-ND1P03886 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.75□□□□□ -0.21
MT-ND1P03886 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
MT-ND1P03886 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 AC118758.2-201ENST00000614242 2813 ntBASIC13.75□□□□□ -0.21
MT-ND1P03886 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 LINC00567-201ENST00000569854 3409 ntBASIC13.75□□□□□ -0.21
MT-ND1P03886 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 NCLP1-201ENST00000445357 1963 ntBASIC13.75□□□□□ -0.21
MT-ND1P03886 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
MT-ND1P03886 RNU1-114P-201ENST00000365297 166 ntBASIC13.75□□□□□ -0.21
MT-ND1P03886 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.75□□□□□ -0.21
MT-ND1P03886 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
MT-ND1P03886 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms