Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DRAP01903 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRAP01903 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRAP01903 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.58■□□□□ 0.08
HLA-DRAP01903 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
HLA-DRAP01903 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.58■□□□□ 0.08
HLA-DRAP01903 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
HLA-DRAP01903 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AC005740.2-201ENST00000511085 419 ntBASIC15.57■□□□□ 0.08
HLA-DRAP01903 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 CSH2-206ENST00000560142 749 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AL022328.3-201ENST00000607943 679 ntBASIC15.57■□□□□ 0.08
HLA-DRAP01903 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.57■□□□□ 0.08
HLA-DRAP01903 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
HLA-DRAP01903 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 AC078875.1-201ENST00000431907 724 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 AC006033.1-201ENST00000440505 426 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 AC004898.1-201ENST00000451057 766 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 AC013355.1-201ENST00000562625 723 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 AL451050.2-201ENST00000606967 682 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 MIR6869-201ENST00000619434 62 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 AC090386.2-201ENST00000623010 1039 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 AHCYP4-201ENST00000419201 1315 ntBASIC15.56■□□□□ 0.08
HLA-DRAP01903 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.56■□□□□ 0.08
HLA-DRAP01903 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DRAP01903 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms