Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC15.36■□□□□ 0.05
TIMP1P01033 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TIMP1P01033 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TIMP1P01033 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.36■□□□□ 0.05
TIMP1P01033 ACTBP14-201ENST00000411655 1089 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC15.36■□□□□ 0.05
TIMP1P01033 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC15.36■□□□□ 0.05
TIMP1P01033 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TIMP1P01033 EEF1DP5-201ENST00000431410 772 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 SOD2-205ENST00000444946 917 ntTSL 2 BASIC15.36■□□□□ 0.05
TIMP1P01033 HIST1H2APS2-201ENST00000454426 370 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 RN7SL351P-201ENST00000469306 248 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.36■□□□□ 0.05
TIMP1P01033 SRP14-208ENST00000560773 468 ntTSL 3 BASIC15.36■□□□□ 0.05
TIMP1P01033 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC15.36■□□□□ 0.05
TIMP1P01033 RN7SL605P-201ENST00000577229 281 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 MIR4254-201ENST00000581063 76 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC15.36■□□□□ 0.05
TIMP1P01033 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TIMP1P01033 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.36■□□□□ 0.05
TIMP1P01033 AC008536.3-201ENST00000623282 1599 ntBASIC15.36■□□□□ 0.05
TIMP1P01033 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TIMP1P01033 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
TIMP1P01033 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 GOLGA8UP-201ENST00000527159 1755 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 AL157823.1-201ENST00000403727 628 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 AL137244.1-201ENST00000422931 865 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 ALG1L7P-201ENST00000502317 768 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 URB1-AS1-201ENST00000534991 831 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 AC126755.5-201ENST00000622756 267 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 AC233280.19-201ENST00000633223 136 ntBASIC15.35■□□□□ 0.05
TIMP1P01033 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.35■□□□□ 0.05
TIMP1P01033 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.35■□□□□ 0.05
TIMP1P01033 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TIMP1P01033 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TIMP1P01033 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC15.34■□□□□ 0.05
TIMP1P01033 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms