Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.65□□□□□ -0.06
GPC4O75487 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.65□□□□□ -0.06
GPC4O75487 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.65□□□□□ -0.06
GPC4O75487 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.65□□□□□ -0.06
GPC4O75487 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 AC138951.2-201ENST00000623455 1161 ntBASIC14.65□□□□□ -0.06
GPC4O75487 RHOXF1P1-202ENST00000635473 501 ntBASIC14.65□□□□□ -0.06
GPC4O75487 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.65□□□□□ -0.06
GPC4O75487 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 AC020910.5-201ENST00000623668 1865 ntBASIC14.65□□□□□ -0.06
GPC4O75487 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.65□□□□□ -0.06
GPC4O75487 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.65□□□□□ -0.06
GPC4O75487 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
GPC4O75487 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
GPC4O75487 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
GPC4O75487 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.64□□□□□ -0.07
GPC4O75487 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
GPC4O75487 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
GPC4O75487 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
GPC4O75487 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.64□□□□□ -0.07
GPC4O75487 FAM8A4P-201ENST00000435433 1213 ntBASIC14.64□□□□□ -0.07
GPC4O75487 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 ACA64.2-201ENST00000459014 129 ntBASIC14.64□□□□□ -0.07
GPC4O75487 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.64□□□□□ -0.07
GPC4O75487 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.64□□□□□ -0.07
GPC4O75487 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
GPC4O75487 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
GPC4O75487 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GPC4O75487 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
GPC4O75487 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.64□□□□□ -0.07
GPC4O75487 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GPC4O75487 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms