Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.27■□□□□ 0.04
OPHN1O60890 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.27■□□□□ 0.04
OPHN1O60890 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 MIR1202-201ENST00000408529 83 ntBASIC15.27■□□□□ 0.04
OPHN1O60890 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC15.27■□□□□ 0.04
OPHN1O60890 UPF3AP2-201ENST00000457924 1132 ntBASIC15.27■□□□□ 0.04
OPHN1O60890 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
OPHN1O60890 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.27■□□□□ 0.04
OPHN1O60890 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.27■□□□□ 0.04
OPHN1O60890 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
OPHN1O60890 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.27■□□□□ 0.04
OPHN1O60890 EEF1DP1-201ENST00000585891 896 ntBASIC15.27■□□□□ 0.04
OPHN1O60890 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.27■□□□□ 0.04
OPHN1O60890 AC145423.3-201ENST00000615987 467 ntBASIC15.27■□□□□ 0.04
OPHN1O60890 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
OPHN1O60890 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
OPHN1O60890 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
OPHN1O60890 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPHN1O60890 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPHN1O60890 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPHN1O60890 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OPHN1O60890 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.27■□□□□ 0.03
OPHN1O60890 HSPA7-201ENST00000445535 1927 ntBASIC15.27■□□□□ 0.03
OPHN1O60890 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
OPHN1O60890 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
OPHN1O60890 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
OPHN1O60890 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.27■□□□□ 0.03
OPHN1O60890 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.27■□□□□ 0.03
OPHN1O60890 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.27■□□□□ 0.03
OPHN1O60890 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.27■□□□□ 0.03
OPHN1O60890 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
OPHN1O60890 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 AL138725.1-201ENST00000407347 1314 ntBASIC15.26■□□□□ 0.03
OPHN1O60890 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 CSH2-202ENST00000345366 598 ntTSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.26■□□□□ 0.03
OPHN1O60890 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.26■□□□□ 0.03
OPHN1O60890 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.26■□□□□ 0.03
OPHN1O60890 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.26■□□□□ 0.03
OPHN1O60890 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.26■□□□□ 0.03
OPHN1O60890 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 AC015818.8-201ENST00000587907 1519 ntBASIC15.26■□□□□ 0.03
OPHN1O60890 AC092135.3-201ENST00000624151 1846 ntBASIC15.26■□□□□ 0.03
OPHN1O60890 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
OPHN1O60890 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.26■□□□□ 0.03
OPHN1O60890 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
OPHN1O60890 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
OPHN1O60890 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
OPHN1O60890 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms