Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HCN1O60741 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 POM121L8P-201ENST00000417732 1281 ntBASIC13.67□□□□□ -0.22
HCN1O60741 POM121L9P-203ENST00000441984 1285 ntBASIC13.67□□□□□ -0.22
HCN1O60741 CNN2P10-201ENST00000443067 918 ntBASIC13.67□□□□□ -0.22
HCN1O60741 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.67□□□□□ -0.22
HCN1O60741 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HCN1O60741 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 C2orf69P2-201ENST00000562032 1123 ntBASIC13.67□□□□□ -0.22
HCN1O60741 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.67□□□□□ -0.22
HCN1O60741 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 AC015818.8-201ENST00000587907 1519 ntBASIC13.67□□□□□ -0.22
HCN1O60741 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 AC020907.1-201ENST00000616460 1350 ntBASIC13.67□□□□□ -0.22
HCN1O60741 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 AL354702.1-201ENST00000442006 1960 ntBASIC13.67□□□□□ -0.22
HCN1O60741 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.67□□□□□ -0.22
HCN1O60741 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HCN1O60741 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.67□□□□□ -0.22
HCN1O60741 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HCN1O60741 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 MIR326-201ENST00000362220 95 ntBASIC13.66□□□□□ -0.22
HCN1O60741 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.66□□□□□ -0.22
HCN1O60741 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 GOLGA2P4-201ENST00000441462 777 ntBASIC13.66□□□□□ -0.22
HCN1O60741 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 AC108725.1-201ENST00000495472 409 ntBASIC13.66□□□□□ -0.22
HCN1O60741 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.66□□□□□ -0.22
HCN1O60741 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.66□□□□□ -0.22
HCN1O60741 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.66□□□□□ -0.22
HCN1O60741 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HCN1O60741 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HCN1O60741 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.66□□□□□ -0.22
HCN1O60741 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HCN1O60741 DGCR9-201ENST00000609630 2415 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms