Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CHMP2AO43633 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHMP2AO43633 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHMP2AO43633 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP2AO43633 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP2AO43633 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP2AO43633 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
CHMP2AO43633 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 AC090857.1-201ENST00000527400 390 ntBASIC16.32■□□□□ 0.2
CHMP2AO43633 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 PGAM1P5-201ENST00000548011 764 ntBASIC16.32■□□□□ 0.2
CHMP2AO43633 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP2AO43633 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP2AO43633 AC005586.2-201ENST00000563946 837 ntBASIC16.32■□□□□ 0.2
CHMP2AO43633 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CHMP2AO43633 AC124068.2-201ENST00000569473 1109 ntBASIC16.32■□□□□ 0.2
CHMP2AO43633 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP2AO43633 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP2AO43633 AL021578.1-201ENST00000613646 709 ntBASIC16.32■□□□□ 0.2
CHMP2AO43633 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP2AO43633 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CHMP2AO43633 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP2AO43633 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP2AO43633 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP2AO43633 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP2AO43633 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP2AO43633 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP2AO43633 AC015802.1-201ENST00000588104 1449 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 AC008132.1-202ENST00000342005 1389 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP2AO43633 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 Z97180.1-201ENST00000445173 988 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP2AO43633 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP2AO43633 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 AC003686.1-201ENST00000550956 1034 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP2AO43633 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP2AO43633 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CHMP2AO43633 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 AP001505.2-201ENST00000616815 443 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CHMP2AO43633 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CHMP2AO43633 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.31■□□□□ 0.2
CHMP2AO43633 BX640514.1-201ENST00000583223 1918 ntBASIC16.31■□□□□ 0.2
CHMP2AO43633 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.31■□□□□ 0.2
CHMP2AO43633 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP2AO43633 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms