Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 POM121L8P-201ENST00000417732 1281 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 POM121L9P-203ENST00000441984 1285 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.76□□□□□ -0.05
RIPK2O43353 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.76□□□□□ -0.05
RIPK2O43353 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.76□□□□□ -0.05
RIPK2O43353 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.76□□□□□ -0.05
RIPK2O43353 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.76□□□□□ -0.05
RIPK2O43353 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.76□□□□□ -0.05
RIPK2O43353 AC099568.2-201ENST00000609194 695 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 AC138466.3-201ENST00000619983 221 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 AC093028.1-201ENST00000622998 982 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 AL355102.3-201ENST00000554299 1678 ntBASIC14.76□□□□□ -0.05
RIPK2O43353 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
RIPK2O43353 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.76□□□□□ -0.05
RIPK2O43353 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RIPK2O43353 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 AC009093.2-202ENST00000620513 2079 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 AP000437.1-201ENST00000624057 2085 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 FKBP4P6-201ENST00000457486 1332 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 ACKR1-201ENST00000368121 1240 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 AK2P2-201ENST00000439142 405 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 AC245100.3-201ENST00000441281 285 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 GNAQP1-201ENST00000444815 1067 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.75□□□□□ -0.05
RIPK2O43353 KRT18P25-201ENST00000508931 1278 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.75□□□□□ -0.05
RIPK2O43353 DUX4L27-201ENST00000554796 1261 ntBASIC14.75□□□□□ -0.05
RIPK2O43353 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.75□□□□□ -0.05
RIPK2O43353 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.75□□□□□ -0.05
RIPK2O43353 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.75□□□□□ -0.05
RIPK2O43353 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.75□□□□□ -0.05
RIPK2O43353 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RIPK2O43353 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
RIPK2O43353 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RIPK2O43353 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RIPK2O43353 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
RIPK2O43353 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.74□□□□□ -0.05
RIPK2O43353 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.74□□□□□ -0.05
RIPK2O43353 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms