Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC19.36■□□□□ 0.69
CHD2O14647 AL139424.3-202ENST00000641619 917 ntBASIC19.36■□□□□ 0.69
CHD2O14647 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHD2O14647 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHD2O14647 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHD2O14647 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD2O14647 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHD2O14647 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 OR7E12P-201ENST00000344740 973 ntBASIC19.35■□□□□ 0.69
CHD2O14647 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHD2O14647 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CHD2O14647 RN7SL672P-201ENST00000474091 317 ntBASIC19.35■□□□□ 0.69
CHD2O14647 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC19.35■□□□□ 0.69
CHD2O14647 INCA1-204ENST00000576820 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 AC008622.3-201ENST00000621170 600 ntBASIC19.35■□□□□ 0.69
CHD2O14647 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.35■□□□□ 0.69
CHD2O14647 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 LINC00554-201ENST00000564841 3011 ntBASIC19.35■□□□□ 0.69
CHD2O14647 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 PTN-202ENST00000393083 1599 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD2O14647 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD2O14647 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC19.35■□□□□ 0.69
CHD2O14647 AL954722.1-201ENST00000431238 259 ntBASIC19.35■□□□□ 0.69
CHD2O14647 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 RPL29P2-202ENST00000498671 657 ntBASIC19.35■□□□□ 0.69
CHD2O14647 CETN3-205ENST00000522842 664 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHD2O14647 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC19.35■□□□□ 0.69
CHD2O14647 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC19.35■□□□□ 0.69
CHD2O14647 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHD2O14647 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 AL121753.2-201ENST00000624581 1461 ntBASIC19.34■□□□□ 0.69
CHD2O14647 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CHD2O14647 RPL18AP15-201ENST00000430258 517 ntBASIC19.34■□□□□ 0.69
CHD2O14647 HLA-W-207ENST00000439514 771 ntBASIC19.34■□□□□ 0.69
CHD2O14647 OR4C14P-201ENST00000440929 923 ntBASIC19.34■□□□□ 0.69
CHD2O14647 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC19.34■□□□□ 0.69
CHD2O14647 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC19.34■□□□□ 0.69
CHD2O14647 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CHD2O14647 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CHD2O14647 KRT8P42-201ENST00000405771 1399 ntBASIC19.34■□□□□ 0.69
CHD2O14647 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.34■□□□□ 0.69
CHD2O14647 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.34■□□□□ 0.69
CHD2O14647 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHD2O14647 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CHD2O14647 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CHD2O14647 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms