Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AC126335.2-201ENST00000623362 4637 ntBASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA3F8WFD2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 VDAC1P1-201ENST00000439229 848 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AL035414.1-201ENST00000451327 857 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 HLA-J-204ENST00000495278 958 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AC113367.3-201ENST00000508316 1912 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 C8orf49-201ENST00000525043 1968 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 LINC00552-201ENST00000625151 2579 ntBASIC13.26□□□□□ -0.29
NPIPA3F8WFD2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 AC140479.7-201ENST00000636301 2332 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 KRT8P19-201ENST00000551916 1455 ntBASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.25□□□□□ -0.29
NPIPA3F8WFD2 AC022447.6-201ENST00000515522 438 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms