Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
NPIPA2E9PIF3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 AC136759.1-202ENST00000530858 2194 ntBASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
NPIPA2E9PIF3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 RN7SKP214-201ENST00000364208 315 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 RCC2P8-201ENST00000502779 1035 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 ALG3P1-201ENST00000508806 1114 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 GCOM2-201ENST00000509133 1104 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 SCARNA21-201ENST00000517026 139 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC090857.1-201ENST00000527400 390 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC131206.1-201ENST00000538078 1211 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AL160314.3-201ENST00000556041 767 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 BX088702.1-201ENST00000610784 235 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC015967.2-201ENST00000624092 234 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC006435.4-201ENST00000625037 234 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AL356737.1-201ENST00000634391 234 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 NAP1L6-202ENST00000641404 1222 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AC126335.2-201ENST00000623362 4637 ntBASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.27□□□□□ -0.29
NPIPA2E9PIF3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.26□□□□□ -0.29
NPIPA2E9PIF3 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms