Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AL136301.1-201ENST00000615830 422 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
SRRM4A7MD48 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 SHC1P1-201ENST00000425230 1745 ntBASIC11.72□□□□□ -0.53
SRRM4A7MD48 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SRRM4A7MD48 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AC023794.5-201ENST00000564380 2157 ntBASIC11.71□□□□□ -0.53
SRRM4A7MD48 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 MXI1-205ENST00000393134 889 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 USB1-202ENST00000423271 1217 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 KRT43P-201ENST00000434019 910 ntBASIC11.71□□□□□ -0.53
SRRM4A7MD48 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.71□□□□□ -0.53
SRRM4A7MD48 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 AC105233.6-201ENST00000642093 218 ntBASIC11.71□□□□□ -0.53
SRRM4A7MD48 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
SRRM4A7MD48 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SRRM4A7MD48 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
SRRM4A7MD48 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.71□□□□□ -0.54
SRRM4A7MD48 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
SRRM4A7MD48 PDIA3P1-201ENST00000471856 1510 ntBASIC11.7□□□□□ -0.54
SRRM4A7MD48 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 LINC02486-201ENST00000604157 3000 ntBASIC11.7□□□□□ -0.54
SRRM4A7MD48 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
SRRM4A7MD48 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC11.7□□□□□ -0.54
SRRM4A7MD48 RPL7P3-201ENST00000441388 714 ntBASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms