Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RCCD1A6NED2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RCCD1A6NED2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.06
RCCD1A6NED2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.06
RCCD1A6NED2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
RCCD1A6NED2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC134312.5-201ENST00000568031 1313 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC009093.10-201ENST00000641956 1442 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC125807.2-201ENST00000513358 3514 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 USP17L6P-201ENST00000382470 1197 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC087499.6-201ENST00000411576 835 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 BAATP1-201ENST00000412284 1225 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 CICP12-201ENST00000455801 843 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 INGX-202ENST00000489074 768 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC106760.1-201ENST00000508690 800 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 GNRHR2-203ENST00000581100 1187 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 PCDHA6-201ENST00000378126 3267 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AL445209.1-201ENST00000607269 3491 ntBASIC15.45■□□□□ 0.06
RCCD1A6NED2 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RCCD1A6NED2 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.45■□□□□ 0.06
RCCD1A6NED2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 AP002761.4-201ENST00000565433 3361 ntBASIC15.44■□□□□ 0.06
RCCD1A6NED2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RCCD1A6NED2 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 AC068587.3-201ENST00000526613 355 ntBASIC15.44■□□□□ 0.06
RCCD1A6NED2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.44■□□□□ 0.06
RCCD1A6NED2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms