Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MIR4750-201ENST00000584564 56 ntBASIC21.03■□□□□ 0.96
HFM1A2PYH4 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HFM1A2PYH4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HFM1A2PYH4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 RNVU1-8-201ENST00000364272 125 ntBASIC21.02■□□□□ 0.96
HFM1A2PYH4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
HFM1A2PYH4 IGHV1-12-201ENST00000518307 205 ntBASIC21.02■□□□□ 0.96
HFM1A2PYH4 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HFM1A2PYH4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC21.02■□□□□ 0.95
HFM1A2PYH4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 KRT8P24-201ENST00000560290 1559 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 ODCP-201ENST00000459650 1639 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 AL157996.1-201ENST00000624684 2299 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 KRT8P2-201ENST00000556193 944 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 RN7SL736P-201ENST00000613111 269 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HFM1A2PYH4 AC004554.1-201ENST00000422830 1468 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC21.01■□□□□ 0.95
HFM1A2PYH4 TBC1D27-202ENST00000424239 1573 ntBASIC21.01■□□□□ 0.95
HFM1A2PYH4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HFM1A2PYH4 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC21■□□□□ 0.95
HFM1A2PYH4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
HFM1A2PYH4 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HFM1A2PYH4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
HFM1A2PYH4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC21■□□□□ 0.95
HFM1A2PYH4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 AL355334.1-201ENST00000417713 215 ntBASIC21■□□□□ 0.95
HFM1A2PYH4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC21■□□□□ 0.95
HFM1A2PYH4 AC092573.1-201ENST00000433054 884 ntBASIC21■□□□□ 0.95
HFM1A2PYH4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 AK2P2-201ENST00000439142 405 ntBASIC21■□□□□ 0.95
HFM1A2PYH4 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC21■□□□□ 0.95
HFM1A2PYH4 OR5BD1P-201ENST00000532527 817 ntBASIC21■□□□□ 0.95
HFM1A2PYH4 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
HFM1A2PYH4 MIR4265-201ENST00000582152 99 ntBASIC21■□□□□ 0.95
HFM1A2PYH4 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
HFM1A2PYH4 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC21■□□□□ 0.95
HFM1A2PYH4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 GOLGA8UP-201ENST00000527159 1755 ntBASIC21■□□□□ 0.95
HFM1A2PYH4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HFM1A2PYH4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HFM1A2PYH4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HFM1A2PYH4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HFM1A2PYH4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms