Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNCAIPQ9Y6H5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SNCAIPQ9Y6H5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L2-201ENST00000561772 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 AC092437.1-201ENST00000624794 1048 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L6-201ENST00000626483 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L1-201ENST00000627662 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L8-201ENST00000629013 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L3-201ENST00000630187 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L7-201ENST00000630678 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 DUX4L5-201ENST00000630834 1275 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 TSPY26P-201ENST00000476365 1326 ntBASIC26.65■■□□□ 1.86
SNCAIPQ9Y6H5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 SLC47A1P1-202ENST00000449666 945 ntBASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC26.64■■□□□ 1.86
SNCAIPQ9Y6H5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.64■■□□□ 1.85
SNCAIPQ9Y6H5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNCAIPQ9Y6H5 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 DUSP8P4-201ENST00000399538 1761 ntBASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.62■■□□□ 1.85
SNCAIPQ9Y6H5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 AL137784.2-201ENST00000607332 1000 ntBASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNCAIPQ9Y6H5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SNCAIPQ9Y6H5 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SNCAIPQ9Y6H5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 AC027612.3-201ENST00000413684 1047 ntBASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
SNCAIPQ9Y6H5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms