Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.66■■□□□ 1.06
AP4B1Q9Y6B7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 GUSBP5-202ENST00000510805 1989 ntBASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
AP4B1Q9Y6B7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.64■■□□□ 1.06
AP4B1Q9Y6B7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 AC139795.1-202ENST00000500444 432 ntBASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 AC074183.2-201ENST00000623112 922 ntBASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AP4B1Q9Y6B7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 BHLHE23-202ENST00000612929 1109 ntBASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
AP4B1Q9Y6B7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 RPS2P7-201ENST00000447334 885 ntBASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 AC087393.1-201ENST00000582896 145 ntBASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
AP4B1Q9Y6B7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AP4B1Q9Y6B7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AP4B1Q9Y6B7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
AP4B1Q9Y6B7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
AP4B1Q9Y6B7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
AP4B1Q9Y6B7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP4B1Q9Y6B7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AP4B1Q9Y6B7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.58■■□□□ 1.05
AP4B1Q9Y6B7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.58■■□□□ 1.05
AP4B1Q9Y6B7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.58■■□□□ 1.05
AP4B1Q9Y6B7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.58■■□□□ 1.05
AP4B1Q9Y6B7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
AP4B1Q9Y6B7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
AP4B1Q9Y6B7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP4B1Q9Y6B7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AP4B1Q9Y6B7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
AP4B1Q9Y6B7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
AP4B1Q9Y6B7 HLA-L-211ENST00000482052 1765 ntBASIC21.57■■□□□ 1.04
AP4B1Q9Y6B7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.57■■□□□ 1.04
AP4B1Q9Y6B7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
AP4B1Q9Y6B7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms